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陈素明课题组(质谱研究组)

简介 化学与生物质谱

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质谱技术研究是国际前沿研究方向,在质谱的发展史中,已有十三个诺贝尔奖授予了与质谱技术的诞生、发展以及应用有关的研究。质谱技术已经成为化学、生命科学、生物医学、医药研发、疾病诊疗等各个基础和应用科学领域不可或缺的分析手段。我们课题组主要从事质谱分析技术和质谱仪器装置的开发与应用研究,尤其注重发展创新分析策略来解决生物医学、合成化学以及化学生物学等前沿交叉科学研究领域中的关键问题。课题组依托武汉大学高等研究院和武汉大学化学及生物学双一流重点建设学科,以质谱科学研究为学科交叉点,发展化学、生物、医学等多学科的分析技术和应用。已经配备了研究所需的多台高端质谱仪器,包括静电场轨道阱组合式高分辨质谱仪(LTQ Velos Orbitrap Elite MS)、线性离子阱质谱仪(LTQ XL MS)、基质辅助激光解吸电离-飞行时间质谱仪(MALDI-TOF/TOF MS)、高分辨离子淌度质谱仪(TIMS TOF Pro MS)等,并自主研发了光化学反应在线质谱分析系统、高通量化学反应质谱筛选系统等装备。此外,还建成了设备精良的合成化学、生物分析等研究平台,可以为高水平的研究提供充分的保障。我们的团队成员拥有化学、生物医学、生物信息学等跨学科专业背景,将在前沿交叉科学研究领域里进行深入的探索。本课题组长期招收博士后、推免硕士研究生、申请考核制博士研究生,培养专业为化学和生物学,欢迎有志于质谱及交叉科学研究的同学加入! 

Mass spectrometry is one of the research frontier of modern sciences. There have been 13 Nobel prizes granted to the researches of mass spectrometry during its generation, development and applications in its developmental history. Mass spectrometric techniques have become the indispensable analytical approaches in chemistry, life sciences, biomedicine, medicinal development and many basic and applied disciplines. Our group are interested in the analytical techniques, instrumentation and applications of mass spectrometry, especially the development of innovative analytical strategies for solving the critical issues in biomedicine, synthetic chemistry, chemical biology, and other interdisciplinary sciences. Our research group relies on the Institute for Advanced Studies of Wuhan University, and the national key contruction subjects of chemistry and biology. By focusing on the mass spectrometric science, we are developing the multidiciplinary analytical methods and applications, such as chemsitry, biology, medicine, etc. The group has equipped several high-end mass spectrometers, including the LTQ Orbitrap Elite MS, LTQ XL MS, MALDI TOF/TOF MS and TIMS Pro Ion mobility MS, as well as the self-developed online mass spectrometric analytical systems for photochemical reactions and high throughput reaction discovery. In addition, we also established the excellent research platform for synthetic chemistry and biological analysis. These platforms could fully meet the requirements of high-level scientific researches. The members in our group possess different research backgrouds including chemistry, biology and bioinformatics. We will explore deeply in the interdisciplinary research areas with full of our passion!

More than a picture

News & Views | Published: 05 February 2015

Molecular histology

More than a picture

Richard W. Vachet

Department of Chemistry, University of Massachusetts Amherst, Amherst, Massachusetts 01003, USA

Nature Nanotechnology, 2015, 10, 103–104

A label-free mass spectrometry imaging method maps the locations of carbon nanomaterials injected into mice through the detection of small carbon clusters.

The old saying that 'a picture is worth a thousand words' is no less true in science. Our understanding of biological processes in different organs has long been informed by pictures from histological studies. Recently, there has been tremendous interest in adding a molecular component to such images. Molecular histology, as it is often called, can reveal the underlying biochemistry of tissues and organs, while simultaneously providing information on how therapeutics or toxins influence the function or misfunction of an organ. Now, writing in Nature Nanotechnology, Zhongxiu Nie and colleagues at the Chinese Academy of Sciences and Ohio State University describe a mass spectrometry-based method to perform molecular histology on carbon nanomaterials in tissues of mice1. The imaging approach offers a powerful way to quantitatively evaluate the fate of carbon nanomaterials in vivo.

Imaging mass spectrometry has emerged as a unique tool by which individual molecular species can be directly detected in tissues with spatial resolutions around 20 μm or less2. The technique is inherently 'label free' because all molecules have mass, and as long as they can be ionized, they can be detected. One of the most common methods for ionizing molecules in imaging mass spectrometry is by matrix-assisted laser desorption/ionization (MALDI), whereby an organic matrix (usually in an excess of 10,000 to 1 molar ratio over the analytes) is typically co-crystallized with a sample of interest and then irradiated with a laser3. The matrix absorbs the laser irradiation, is rapidly excited and vapourized, and subsequently the co-crystallized analytes are transferred into the gas phase, where the analyte can be ionized by charge transfer from the matrix. However, no one has demonstrated the ability of MALDI to detect intact carbon nanomaterials because it is challenging to co-crystallize appropriate matrices with carbon nanomaterials. Without a matrix, it is difficult to desorb the analytes intact into the gas phase.

To solve this problem, Nie and co-workers forgo the use of the traditional matrix and rely on the strong absorbance of carbon nanomaterials in the near-ultraviolet region of the electromagnetic spectrum. Because most biological molecules do not absorb light very well in the near-ultraviolet, the result is the selective detection of small carbon clusters (C2–C10) arising from the desorption and ionization of carbon nanomaterial fragments with almost no background signal from any biologically derived molecules. By rastering the laser across tissue slices, individual mass spectra can be obtained, and the carbon cluster signals can then be used to generate an image that shows the locations of the carbon nanomaterial (Fig. 1). When used with appropriate standards, the quantities of the carbon nanomaterials at given locations can be determined.

Figure 1: Laser desorption/ionization mass spectrometry imaging of carbon nanomaterials in tissues. a, Carbon nanotubes, graphene oxide, or carbon nanodots are injected into mice. The mice are killed, organs of interest are taken and sectioned, and laser desorption/ionization mass spectrometry is used to image the locations of the carbon nanomaterials (blue outlines). The laser is rastered across the tissue, and mass spectra are acquired at each spot. b, Images are generated by plotting carbon cluster ion intensities as a function of location in the tissue. Shown here as an example is an image of a spleen from a mouse treated with carbon nanotubes. Red areas are where carbon nanotubes are found. Panel reproduced from ref. 1, 2015 Nature Publishing Group.

 

There are several merits to this mass spectrometry-based molecular imaging approach. Because it is label free, the carbon nanomaterials do not need to be modified for them to be detectable. Furthermore, there is no need to worry about any loss of label in vivo, or to account for the way the label might affect the biological distributions of the nanomaterials. Moreover, Nie and co-workers showed that the method can provide quantitative information about carbon nanotubes, graphene oxide and carbon nanodots in a variety of tissues. The quantitative images reveal valuable insights into how the carbon nanomaterials are trafficked and processed by different organs. For example, images of the spleen clearly show that carbon nanomaterials concentrate in the marginal zone between the red and white pulp. Because the marginal zone is responsible for presenting circulating antigens to lymphocytes (a type of white blood cell) in the spleen, this suggests an immune response4. Such information is difficult to obtain by any other means.

Another key advantage of the approach is that it should, in principle, work for other types of nanomaterial that absorb well in the near-ultraviolet. Nie and colleagues demonstrate that molybdenum disulfide nanosheets can also be monitored, and a recent study has shown gold nanoparticles can be imaged using a similar approach5.

As promising as the method is, detecting carbon cluster ions as proxies for the carbon nanomaterials means that the method does not directly indicate whether the carbon nanomaterials have been transformed in vivo. Any reactions (for example oxidation) undergone by the nanomaterials might be apparent in any new cluster ions that appear, but knowing the extent to which the nanomaterials are degraded would seem beyond the capabilities of the current imaging method.

Nonetheless, imaging mass spectrometry has a bright future when it comes to studying nanomaterials in vivo. One particularly exciting advance would be to extend the reported approach to enable the simultaneous detection of nanomaterials and nearby proteins or other biomolecules. Images that reveal what biological molecules orient themselves around nanomaterials would provide an even deeper understanding of the biochemical effects of such materials. One would think that pictures such as this might then be worth ten thousand words or more.

https://www.nature.com/articles/nnano.2015.4

References

  1. Chen, S. et al. Nature Nanotech. 10, 176–182 (2015).
  2. Chughtai, K. & Heeren, R. A. Chem. Rev. 110, 3257–3277 (2010).
  3. Norris, J. L. & Caprioli, R. M. Chem. Rev. 113, 2309–2342 (2013).
  4. Mebius, R. E. & Kraal, G. Nature Rev. Immunol. 5, 606–616 (2005).
  5. Yan, B. et al. J. Am. Chem. Soc. 135, 12564–12567 (2013).

Biological mass spectrometry

Our research focuses on the mass spectrometry, including the instrumentation, methods development and applications. This mass spectrometric study has become the intersection of multidisciplinary researches, such as chemistry, biology medicine and material science. We are very interested in biological mass spectrometric analysis, especially the bio-omics researches by using chemical biological and bioinformatic approaches. The predominant advantages of mass spectrometry in quanlification and quantification promoted the rapid development of modern biological and life sciences. We are focusing on the unsolved difficulties behind the mass spectrometry-based proteomics, metabolomics, lipidomics and integrated bio-omics. For example, the deep analysis and exploration of the biological functions of isomeric bioactive molecules, and reveal their important roles in the diagnostics, development and therapy of critial diseases. By the development of unique mass spectrometric methods, we could uncover the mysterious molecular mechanism behind the physicological and pathological processes of living systems.

 

Chemical Mass Spectrometry

We are interested in the development of novel mass spectrometric apparatus for the in situ and ambient ionization. These instrumental setups will be targeted on the real time, online reaction studies, especially the OPERANDO chemical reaction studies with mass spectrometry and other integrated techniques, which enable the capture of short-lived reaction intermediates. Based on these novel and creative designes, the methods are developed for the elucidation of underlying mechanism of chemical and biological reactions, as well as the high throughput new reaction discovery, which will be applied to the design of new reaction pathways and synthetic methodology. 

 

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